mariadb: Upgrade to 10.3.13

Per https://mariadb.org/about/maintenance-policy/,
mariadb 5.5.x series only supported until next year
April 2020, so upgrade it to 10.3.13.

Remove some deprecated patches, add some
new patches to fix build failure and rework
two patches to avoid fuzz warnings.

Add -latomic to linker flags for armv5

Use -pthread to link for mussing  atomic symbols on arches e.g. riscv

Fixes issues like
ld.bfd: librocksdblib.a(memtable.cc.o):/usr/include/c++/9.0.1/bits/atomic_base.h:438: more undefined references to `__atomic_compare_exchange_1' follow

Fix build with musl

add libxml2 to depends

Fix build with clang

Signed-off-by: Mingli Yu <mingli.yu@windriver.com>
Signed-off-by: Khem Raj <raj.khem@gmail.com>

1 files changed, 0 insertions, 160 deletions

diff --git a/meta-oe/recipes-dbs/mysql/mariadb/fix-mysqlclient-r-version.patch b/meta-oe/recipes-dbs/mysql/mariadb/fix-mysqlclient-r-version.patch
deleted file mode 100644
index a519e42921..0000000000
--- a/meta-oe/recipes-dbs/mysql/mariadb/fix-mysqlclient-r-version.patch
+++ /dev/null
@@ -1,160 +0,0 @@
-From 6db2a606196fb38a6d106dc409eee1cb9a40a440 Mon Sep 17 00:00:00 2001
-From: Tor Didriksen <tor.didriksen@oracle.com>
-Date: Mon, 24 Jun 2013 17:15:35 +0200
-Subject: [PATCH] Bug#16809055 MYSQL 5.6 AND 5.7 STILL USE LIBMYSQLCLIENT.SO.18
-
-With this patch, the libmysql/ directory contains:
-libmysqlclient.a
-libmysqlclient_r.a -> libmysqlclient.a
-libmysqlclient_r.so -> libmysqlclient.so*
-libmysqlclient_r.so.18 -> libmysqlclient.so.18*
-libmysqlclient_r.so.18.1.0 -> libmysqlclient.so.18.1.0*
-libmysqlclient.so -> libmysqlclient.so.18*
-libmysqlclient.so.18 -> libmysqlclient.so.18.1.0*
-libmysqlclient.so.18.1.0*
-
-This fixes libmysqlclient_r symlinks pointing to the unversioned
-libmysqlclient.so symlink (leading to package QA errors since the
-libmysqlclient-r package ends up depending on libmysqlclient-dev).
-
-Borrowed from MySQL 5.6 tree at https://github.com/percona/mysql/
-
-Upstream-Status: Pending
-
-Signed-off-by: Paul Eggleton <paul.eggleton@linux.intel.com>
-
----
- cmake/install_macros.cmake | 25 +++++++++++++++----------
- libmysql/CMakeLists.txt    | 34 +++++++++++++++++++++++++++-------
- 2 files changed, 42 insertions(+), 17 deletions(-)
-
-diff --git a/cmake/install_macros.cmake b/cmake/install_macros.cmake
-index b8efdf8..a0d0e68 100644
---- a/cmake/install_macros.cmake
-+++ b/cmake/install_macros.cmake
-@@ -1,4 +1,4 @@
--# Copyright (c) 2009, 2011, Oracle and/or its affiliates. All rights reserved.
-+# Copyright (c) 2009, 2013, Oracle and/or its affiliates. All rights reserved.
- # 
- # This program is free software; you can redistribute it and/or modify
- # it under the terms of the GNU General Public License as published by
-@@ -167,28 +167,33 @@ ENDFUNCTION()
- 
- 
- # Install symbolic link to CMake target. 
--# the link is created in the same directory as target
--# and extension will be the same as for target file.
--MACRO(INSTALL_SYMLINK linkname target destination component)
-+# We do 'cd path; ln -s target_name link_name'
-+# We also add an INSTALL target for "${path}/${link_name}"
-+MACRO(INSTALL_SYMLINK target target_name link_name destination component)
- IF(UNIX)
-   GET_TARGET_PROPERTY(location ${target} LOCATION)
-   GET_FILENAME_COMPONENT(path ${location} PATH)
--  GET_FILENAME_COMPONENT(name ${location} NAME)
--  SET(output ${path}/${linkname})
-+  MESSAGE(STATUS "target ${target}")
-+  MESSAGE(STATUS "link_name ${link_name}")
-+  MESSAGE(STATUS "target_name ${target_name}")
-+  MESSAGE(STATUS "path ${path}")
-+  MESSAGE(STATUS "")
-+
-+  SET(output ${path}/${link_name})
-   ADD_CUSTOM_COMMAND(
-     OUTPUT ${output}
-     COMMAND ${CMAKE_COMMAND} ARGS -E remove -f ${output}
-     COMMAND ${CMAKE_COMMAND} ARGS -E create_symlink 
--      ${name} 
--      ${linkname}
-+      ${target_name} 
-+      ${link_name}
-     WORKING_DIRECTORY ${path}
-     DEPENDS ${target}
-     )
-   
--  ADD_CUSTOM_TARGET(symlink_${linkname}
-+  ADD_CUSTOM_TARGET(symlink_${link_name}
-     ALL
-     DEPENDS ${output})
--  SET_TARGET_PROPERTIES(symlink_${linkname} PROPERTIES CLEAN_DIRECT_OUTPUT 1)
-+  SET_TARGET_PROPERTIES(symlink_${link_name} PROPERTIES CLEAN_DIRECT_OUTPUT 1)
-   IF(CMAKE_GENERATOR MATCHES "Xcode")
-     # For Xcode, replace project config with install config
-     STRING(REPLACE "${CMAKE_CFG_INTDIR}" 
-diff --git a/libmysql/CMakeLists.txt b/libmysql/CMakeLists.txt
-index be5760f..96286ff 100644
---- a/libmysql/CMakeLists.txt
-+++ b/libmysql/CMakeLists.txt
-@@ -433,6 +433,12 @@ IF(MSVC)
-  INSTALL_DEBUG_TARGET(clientlib DESTINATION ${INSTALL_LIBDIR}/debug)
- ENDIF()
- 
-+MACRO(GET_TARGET_NAME target out_name)
-+  GET_TARGET_PROPERTY(location ${target} LOCATION)
-+  GET_FILENAME_COMPONENT(name ${location} NAME)
-+  SET(${out_name} ${name})
-+ENDMACRO()
-+
- IF(UNIX)
-   MACRO(GET_VERSIONED_LIBNAME LIBNAME EXTENSION VERSION OUTNAME)
-     SET(DOT_VERSION ".${VERSION}")
-@@ -445,7 +451,13 @@ IF(UNIX)
-       SET(${OUTNAME} ${LIBNAME}${EXTENSION}${DOT_VERSION})
-     ENDIF() 
-   ENDMACRO()
--  INSTALL_SYMLINK(${CMAKE_STATIC_LIBRARY_PREFIX}mysqlclient_r.a mysqlclient ${INSTALL_LIBDIR} Development)
-+ENDIF()
-+
-+IF(UNIX)
-+  GET_TARGET_NAME(mysqlclient lib_name)
-+  INSTALL_SYMLINK(mysqlclient
-+    ${lib_name} ${CMAKE_STATIC_LIBRARY_PREFIX}mysqlclient_r.a
-+    ${INSTALL_LIBDIR} Development)
- ENDIF()
- 
- IF(NOT DISABLE_SHARED)
-@@ -456,10 +468,9 @@ IF(NOT DISABLE_SHARED)
-     # libtool compatability
-     IF(CMAKE_SYSTEM_NAME MATCHES "FreeBSD" OR APPLE)
-       SET(OS_SHARED_LIB_VERSION "${SHARED_LIB_MAJOR_VERSION}")
--    ELSEIF(CMAKE_SYSTEM_NAME MATCHES "HP-UX")
--      SET(OS_SHARED_LIB_VERSION "${SHARED_LIB_MAJOR_VERSION}.0")
-     ELSE()
--      SET(OS_SHARED_LIB_VERSION "${SHARED_LIB_MAJOR_VERSION}.0.0")
-+      SET(OS_SHARED_LIB_VERSION
-+        "${SHARED_LIB_MAJOR_VERSION}.${SHARED_LIB_MINOR_VERSION}.0")
-     ENDIF()
-     # Name of shared library is mysqlclient on Unix
-     SET_TARGET_PROPERTIES(libmysql PROPERTIES 
-@@ -482,8 +493,13 @@ IF(NOT DISABLE_SHARED)
-       "${CMAKE_SHARED_LIBRARY_SUFFIX}"
-       ""
-       linkname)
--    INSTALL_SYMLINK(${linkname} libmysql ${INSTALL_LIBDIR} SharedLibraries)
--    SET(OS_SHARED_LIB_SYMLINKS "${SHARED_LIB_MAJOR_VERSION}" "${OS_SHARED_LIB_VERSION}")
-+    GET_TARGET_NAME(libmysql lib_name)
-+    GET_FILENAME_COMPONENT(lib_name_we ${lib_name} NAME_WE)
-+    INSTALL_SYMLINK(libmysql
-+      ${lib_name} ${linkname}
-+      ${INSTALL_LIBDIR} SharedLibraries)
-+    SET(OS_SHARED_LIB_SYMLINKS
-+      "${SHARED_LIB_MAJOR_VERSION}" "${OS_SHARED_LIB_VERSION}")
-     LIST(REMOVE_DUPLICATES OS_SHARED_LIB_SYMLINKS)
-     FOREACH(ver ${OS_SHARED_LIB_SYMLINKS})
-       GET_VERSIONED_LIBNAME(
-@@ -491,7 +507,11 @@ IF(NOT DISABLE_SHARED)
-         "${CMAKE_SHARED_LIBRARY_SUFFIX}"
-         "${ver}"
-         linkname)
--      INSTALL_SYMLINK(${linkname} libmysql ${INSTALL_LIBDIR} SharedLibraries)
-+      GET_VERSIONED_LIBNAME(
-+        ${lib_name_we} "${CMAKE_SHARED_LIBRARY_SUFFIX}" "${ver}" lib_name_ver)
-+      INSTALL_SYMLINK(libmysql
-+        ${lib_name_ver} ${linkname}
-+        ${INSTALL_LIBDIR} SharedLibraries)
-     ENDFOREACH()
-   ENDIF()
- ENDIF()
--- 
-2.0.3
-